Sfoglia per Autore
A Discrete Geometry Method for Atom Depth Computation in Complex Molecular Systems
2024-01-01 Marziali, Sara; Nunziati, Giacomo; Prete, ALESSIA LUCIA; Niccolai, Neri; Brunetti, Sara; Bianchini, Monica
Structural bioinformatic survey of protein-small molecule interfaces delineates the role of glycine in surface pocket formation
2022-01-01 Bongini, Pietro; Niccolai, Neri; Trezza, Alfonso; Mangiavacchi, Guido; Santucci, Annalisa; Spiga, Ottavia; Bianchini, Monica; Gardini, Simone
Structural bioinformatics survey on disease-inducing missense mutations
2021-01-01 Bongini, Pietro; Gardini, Simone; Bianchini, Monica; Spiga, Ottavia; Niccolai, Neri
Structural Bioinformatics to unveil weaknesses of coronavirus spike glycoprotein stability
2021-01-01 Bongini, Pietro; Trezza, Alfonso; Bianchini, Monica; Spiga, Ottavia; Niccolai, Neri
A deep attention network for predicting amino acid signals in the formation of α-helices
2020-01-01 Visibelli, A.; Bongini, P.; Rossi, A.; Niccolai, N.; Bianchini, M.
A possible strategy to fight COVID-19: Interfering with spike glycoprotein trimerization
2020-01-01 Bongini, Pietro; Trezza, Alfonso; Bianchini, Monica; Spiga, Ottavia; Niccolai, Neri
Structural investigation of Rett-inducing MeCP2 mutations
2019-01-01 Spiga, O; Gardini, S; Rossi, N; Cicaloni, V; Pettini, F; Niccolai, N; Santucci, A.
Glycine induced formation and druggability score prediction of protein surface pockets
2019-01-01 Bongini, Pietro; Niccolai, Neri; Bianchini, Monica
Peptides and small molecules blocking the CXCR4/CXCL12 axis overcome bone marrow-induced chemoresistance in acute leukemias
2019-01-01 Pillozzi, Serena; Bernini, Andrea; Spiga, Ottavia; Lelli, Barbara; Petroni, Giulia; Bracci, Luisa; Niccolai, Neri; Arcangeli, Annarosa
Investigations into the killing activity of an antimicrobial peptide active against extensively antibiotic-resistant K. pneumoniae and P. aeruginosa
2017-01-01 van der Weide, Hesse*l; Brunetti, Jlenia; Pini, Alessandro; Bracci, Luisa; Ambrosini, Chiara; Lupetti, Pietro; Paccagnini, Eugenio; Gentile, Mariangela; Bernini, Andrea; Niccolai, Neri; Jongh, Denise Vermeulen de; Bakker Woudenberg, Irma A. J. M; Goessens, Wil H. F; Hays, John P; Falciani, Chiara
Computational approach from gene to structure analysis of the human ABCA4 transporter involved in genetic retinal diseases
2017-01-01 Trezza, Alfonso; Bernini, Andrea; Langella, Andrea; Ascher, David B.; Pires, Douglas E. V.; Sodi, Andrea; Passerini, Ilaria; Pelo, Elisabetta; Rizzo, Stanislao; Niccolai, Neri; Spiga, Ottavia
Hot spot mapping of protein surfaces with TEMPOL: Bovine pancreatic RNase A as a model system
2017-01-01 Niccolai, Neri; Morandi, Edoardo; Gardini, Simone; Costabile, Valentino; Spadaccini, Roberta; Crescenzi, Orlando; Picone, Delia; Spiga, Ottavia; Bernini, Andrea
Toward a generalized computational workflow for exploiting transient pockets as new targets for small molecule stabilizers: Application to the homogentisate 1,2-dioxygenase mutants at the base of rare disease Alkaptonuria
2017-01-01 Bernini, Andrea; Galderisi, Silvia; Spiga, Ottavia; Bernardini, Giulia; Niccolai, Neri; Manetti, Fabrizio; Santucci, Annalisa
Hot spot mapping of protein surfaces with TEMPOL: Bovine pancreatic RNase A as a model system
2017-01-01 Niccolai, Neri; Morandi, Edoardo; Gardini, Simone; Costabile, Valentino; Spadaccini, Roberta; Crescenzi, Orlando; Picone, Delia; Spiga, Ottavia; Bernini, Andrea
A structural bioinformatics investigation on protein–DNA complexes delineates their modes of interaction
2017-01-01 Gardini, Simone; Furini, Simone; Santucci, Annalisa; Niccolai, Neri
Homogentisic acid induces aggregation and fibrillation of amyloidogenic proteins
2017-01-01 Braconi, Daniela; Millucci, Lia; Bernini, Andrea; Spiga, Ottavia; Lupetti, Pietro; Marzocchi, Barbara; Niccolai, Neri; Bernardini, Giulia; Santucci, Annalisa
On nature's strategy for assigning genetic code multiplicity
2016-01-01 Gardini, Simone; Cheli, Sara; Baroni, Silvia; Lascio, Gabriele Di; Mangiavacchi, Guido; Micheletti, Nicholas; Monaco, CARMEN LUIGIA; Savini, Lorenzo; Alocci, Davide; Mangani, Stefano; Niccolai, Neri
Cold Denaturation Unveiled: Molecular Mechanism of the Asymmetric Unfolding of Yeast Frataxin
2015-01-01 Sanfelice, Domenico; Morandi, Edoardo; Pastore, Annalisa; Niccolai, Neri; Temussi, Piero Andrea
Searching for protein binding sites from Molecular Dynamics simulations and paramagnetic fragment-based NMR studies.
2014-01-01 Bernini, Andrea; HENRICI DE ANGELIS, Lucia; Morandi, Edoardo; Spiga, Ottavia; Santucci, Annalisa; Assfalg, M; Molinari, H; Pillozzi, S; Arcangeli, A; Niccolai, Neri
Proteomics and phosphoproteomics provide insights into the mechanism of action of a novel pyrazolo[3,4-d]pyrimidine Src inhibitor in human osteosarcoma.
2014-01-01 Bernardini, Giulia; Laschi, M; Serchi, T; Spreafico, Adriano; Botta, Maurizio; Schenone, S; Arena, S; Geminiani, M; Scaloni, A; Collodel, G; Orlandini, M; Niccolai, Neri; Santucci, Annalisa
| Titolo | Data di pubblicazione | Autore(i) | File | Abstract |
|---|---|---|---|---|
| A Discrete Geometry Method for Atom Depth Computation in Complex Molecular Systems | 1-gen-2024 | Marziali, Sara; Nunziati, Giacomo; Prete, ALESSIA LUCIA; Niccolai, Neri; Brunetti, Sara; Bianchini, Monica | - | |
| Structural bioinformatic survey of protein-small molecule interfaces delineates the role of glycine in surface pocket formation | 1-gen-2022 | Bongini, Pietro; Niccolai, Neri; Trezza, Alfonso; Mangiavacchi, Guido; Santucci, Annalisa; Spiga, Ottavia; Bianchini, Monica; Gardini, Simone | - | |
| Structural bioinformatics survey on disease-inducing missense mutations | 1-gen-2021 | Bongini, Pietro; Gardini, Simone; Bianchini, Monica; Spiga, Ottavia; Niccolai, Neri | - | |
| Structural Bioinformatics to unveil weaknesses of coronavirus spike glycoprotein stability | 1-gen-2021 | Bongini, Pietro; Trezza, Alfonso; Bianchini, Monica; Spiga, Ottavia; Niccolai, Neri | - | |
| A deep attention network for predicting amino acid signals in the formation of α-helices | 1-gen-2020 | Visibelli, A.; Bongini, P.; Rossi, A.; Niccolai, N.; Bianchini, M. | - | |
| A possible strategy to fight COVID-19: Interfering with spike glycoprotein trimerization | 1-gen-2020 | Bongini, Pietro; Trezza, Alfonso; Bianchini, Monica; Spiga, Ottavia; Niccolai, Neri | - | |
| Structural investigation of Rett-inducing MeCP2 mutations | 1-gen-2019 | Spiga, O; Gardini, S; Rossi, N; Cicaloni, V; Pettini, F; Niccolai, N; Santucci, A. | - | |
| Glycine induced formation and druggability score prediction of protein surface pockets | 1-gen-2019 | Bongini, Pietro; Niccolai, Neri; Bianchini, Monica | - | |
| Peptides and small molecules blocking the CXCR4/CXCL12 axis overcome bone marrow-induced chemoresistance in acute leukemias | 1-gen-2019 | Pillozzi, Serena; Bernini, Andrea; Spiga, Ottavia; Lelli, Barbara; Petroni, Giulia; Bracci, Luisa; Niccolai, Neri; Arcangeli, Annarosa | - | |
| Investigations into the killing activity of an antimicrobial peptide active against extensively antibiotic-resistant K. pneumoniae and P. aeruginosa | 1-gen-2017 | van der Weide, Hesse*l; Brunetti, Jlenia; Pini, Alessandro; Bracci, Luisa; Ambrosini, Chiara; Lupetti, Pietro; Paccagnini, Eugenio; Gentile, Mariangela; Bernini, Andrea; Niccolai, Neri; Jongh, Denise Vermeulen de; Bakker Woudenberg, Irma A. J. M; Goessens, Wil H. F; Hays, John P; Falciani, Chiara | - | |
| Computational approach from gene to structure analysis of the human ABCA4 transporter involved in genetic retinal diseases | 1-gen-2017 | Trezza, Alfonso; Bernini, Andrea; Langella, Andrea; Ascher, David B.; Pires, Douglas E. V.; Sodi, Andrea; Passerini, Ilaria; Pelo, Elisabetta; Rizzo, Stanislao; Niccolai, Neri; Spiga, Ottavia | - | |
| Hot spot mapping of protein surfaces with TEMPOL: Bovine pancreatic RNase A as a model system | 1-gen-2017 | Niccolai, Neri; Morandi, Edoardo; Gardini, Simone; Costabile, Valentino; Spadaccini, Roberta; Crescenzi, Orlando; Picone, Delia; Spiga, Ottavia; Bernini, Andrea | - | |
| Toward a generalized computational workflow for exploiting transient pockets as new targets for small molecule stabilizers: Application to the homogentisate 1,2-dioxygenase mutants at the base of rare disease Alkaptonuria | 1-gen-2017 | Bernini, Andrea; Galderisi, Silvia; Spiga, Ottavia; Bernardini, Giulia; Niccolai, Neri; Manetti, Fabrizio; Santucci, Annalisa | - | |
| Hot spot mapping of protein surfaces with TEMPOL: Bovine pancreatic RNase A as a model system | 1-gen-2017 | Niccolai, Neri; Morandi, Edoardo; Gardini, Simone; Costabile, Valentino; Spadaccini, Roberta; Crescenzi, Orlando; Picone, Delia; Spiga, Ottavia; Bernini, Andrea | - | |
| A structural bioinformatics investigation on protein–DNA complexes delineates their modes of interaction | 1-gen-2017 | Gardini, Simone; Furini, Simone; Santucci, Annalisa; Niccolai, Neri | - | |
| Homogentisic acid induces aggregation and fibrillation of amyloidogenic proteins | 1-gen-2017 | Braconi, Daniela; Millucci, Lia; Bernini, Andrea; Spiga, Ottavia; Lupetti, Pietro; Marzocchi, Barbara; Niccolai, Neri; Bernardini, Giulia; Santucci, Annalisa | - | |
| On nature's strategy for assigning genetic code multiplicity | 1-gen-2016 | Gardini, Simone; Cheli, Sara; Baroni, Silvia; Lascio, Gabriele Di; Mangiavacchi, Guido; Micheletti, Nicholas; Monaco, CARMEN LUIGIA; Savini, Lorenzo; Alocci, Davide; Mangani, Stefano; Niccolai, Neri | - | |
| Cold Denaturation Unveiled: Molecular Mechanism of the Asymmetric Unfolding of Yeast Frataxin | 1-gen-2015 | Sanfelice, Domenico; Morandi, Edoardo; Pastore, Annalisa; Niccolai, Neri; Temussi, Piero Andrea | - | |
| Searching for protein binding sites from Molecular Dynamics simulations and paramagnetic fragment-based NMR studies. | 1-gen-2014 | Bernini, Andrea; HENRICI DE ANGELIS, Lucia; Morandi, Edoardo; Spiga, Ottavia; Santucci, Annalisa; Assfalg, M; Molinari, H; Pillozzi, S; Arcangeli, A; Niccolai, Neri | - | |
| Proteomics and phosphoproteomics provide insights into the mechanism of action of a novel pyrazolo[3,4-d]pyrimidine Src inhibitor in human osteosarcoma. | 1-gen-2014 | Bernardini, Giulia; Laschi, M; Serchi, T; Spreafico, Adriano; Botta, Maurizio; Schenone, S; Arena, S; Geminiani, M; Scaloni, A; Collodel, G; Orlandini, M; Niccolai, Neri; Santucci, Annalisa | - |
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